I had a feeling it was a signal ground issue.
Ok - now that you've got a symmetrical pattern you can start playing around with the size. There should be an input gain adjustment pot on your scanner amps. (Note: don't confuse input gain with SERVO GAIN, they are completely different! Adjusting servo gain will change your tuning, while adjusting input gain will not.)
Increase your input gain adjustment on both amps until you get the pattern scanning as wide as you had it with the DMX board hooked up. (Note that you may not be able to get the scan angle to be quite as wide.) Just make sure that they are adjusted evenly so that the image remains symmetrical.
Then run some shows and see how they look!
Adam